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1

Environmental Barcoding Reveals Massive Dinoflagellate Diversity in Marine Environments

Stern, Rowena F., Horak, Ales, Andrew, Rose L., Coffroth, Mary-Alice, Andersen, Robert A., Küpper, Frithjof C., Jameson, Ian, Hoppenrath, Mona, Véron, Benoît, Kasai, Fumai, Brand, Jerry, James, Erick

Journal:

Year:

2010

Language:

english

File:

PDF, 2.56 MB

english, 2010

2

Mucous sheet formation on poritid corals: An evaluation of coral mucus as a nutrient source on reefs

Journal:

Year:

1990

Language:

english

File:

PDF, 1.49 MB

english, 1990

3

New species of Clade B Symbiodinium (Dinophyceae) from the greater Caribbean belong to different functional guilds: S. aenigmaticum sp. nov., S. antillogorgium sp. nov., S. endomadracis sp. nov., and S. pseudominutum sp. nov.

Parkinson, John Everett, Coffroth, Mary Alice, LaJeunesse, Todd C., Lin, S.

Journal:

Journal of Phycology

Year:

2015

Language:

english

File:

PDF, 370 KB

english, 2015

4

Revisiting “Genetic Diversity of Symbiotic Dinoflagellates in the Genus Symbiodinium”

Santos, Scott R., Coffroth, Mary Alice

Journal:

Year:

2018

Language:

english

File:

PDF, 1.45 MB

english, 2018

5

Genetic variation in Breviolum antillogorgium , a coral reef symbiont, in response to temperature and nutrients

Bayliss, Shannon L. J., Scott, Zoë R., Coffroth, Mary Alice, terHorst, Casey P.

Journal:

Ecology and Evolution

Year:

2019

Language:

english

File:

PDF, 793 KB

english, 2019

6

Molecular phylogeny of symbiotic dinoflagellates inferred from partial chloroplast large subunit (23S)-rDNA sequences

Scott R Santos, Derek J Taylor, Robert A Kinzie, III, Michio Hidaka, Kazuhiko Sakai, Mary Alice Coffroth

Journal:

Molecular Phylogenetics and Evolution

Year:

2002

Language:

english

File:

PDF, 249 KB

english, 2002

7

Fine-scale diversity and specificity in the most prevalent lineage of symbiotic dinoflagellates (Symbiodinium, Dinophyceae) of the Caribbean

S. R. Santos, T. L. Shearer, A. R. Hannes, M. A. Coffroth

Journal:

Molecular Ecology

Year:

2004

Language:

english

File:

PDF, 185 KB

english, 2004

8

GENETIC COMPARISONS OF FRESHLY ISOLATED VERSUS CULTURED SYMBIOTIC DINOFLAGELLATES: IMPLICATIONS FOR EXTRAPOLATING TO THE INTACT SYMBIOSIS

Scott R. Santos, Derek J. Taylor, Mary Alice Coffroth

Journal:

Journal of Phycology

Year:

2001

Language:

english

File:

PDF, 551 KB

english, 2001

9

Bleaching of reef coelenterates in the San Blas Islands, Panama

Howard R. Lasker, Esther C. Peters, Mary Alice Coffroth

Journal:

Year:

1984

Language:

english

File:

PDF, 1.50 MB

english, 1984

10

DNA fingerprints of a gorgonian coral: a method for detecting clonal structure in a vegetative species

Mary Alice Coffroth, Howard R. Lasker, Margaret E. Diamond, Jeremy A. Bruenn, Eldredge Bermingham

Journal:

Year:

1992

Language:

english

File:

PDF, 2.05 MB

english, 1992

11

Effects of depth on the feeding capabilities of two octocorals

H. R. Lasker, M. D. Gottfried, M. A. Coffroth

Journal:

Year:

1983

Language:

english

File:

PDF, 611 KB

english, 1983

12

Cyclical mucous sheet formation on poritid corals in the San Blas Islands, Panama

Journal:

Year:

1991

Language:

english

File:

PDF, 559 KB

english, 1991

13

Genetic composition of zooxanthellae between and within colonies of the octocoral Plexaurakuna, based on small subunit rDNA and multilocus DNA fingerprinting

T. Goulet, M. Coffroth

Journal:

Year:

2003

Language:

english

File:

PDF, 434 KB

english, 2003

14

Symbiodiniumsp. associations in the gorgonianPseudopterogorgia elisabethaein the Bahamas: high levels of genetic variability and population structure in symbiotic dinoflagellates

S. R. Santos, C. Gutiérrez-Rodríguez, H. R. Lasker, M. A. Coffroth

Journal:

Year:

2003

Language:

english

File:

PDF, 291 KB

english, 2003

15

Population structure ofSymbiodiniumsp. associated with the common sea fan,Gorgonia ventalina, in the Florida Keys across distance, depth, and time

Nathan L. Kirk, Jason P. Andras, C. Drew Harvell, Scott R. Santos, Mary Alice Coffroth

Journal:

Year:

2009

Language:

english

File:

PDF, 662 KB

english, 2009

16

Larval paternity and male reproductive success of a broadcast-spawning gorgonian,Plexaura kuna

M. A. Coffroth, H. R. Lasker

Journal:

Year:

1998

Language:

english

File:

PDF, 250 KB

english, 1998

17

The genetic identity of dinoflagellate symbionts in Caribbean octocorals

Tamar L. Goulet, Mary Alice Coffroth

Journal:

Year:

2004

Language:

english

File:

PDF, 362 KB

english, 2004

18

Generating molecular markers from zooxanthellate cnidarians

T. L. Shearer, C. Gutiérrez-Rodríguez, M. A. Coffroth

Journal:

Year:

2005

Language:

english

File:

PDF, 365 KB

english, 2005

19

Connectivity and resilience of coral reef metapopulations in marine protected areas: matching empirical efforts to predictive needs

L. W. Botsford, J. W. White, M.- A. Coffroth, C. B. Paris, S. Planes, T. L. Shearer, S. R. Thorrold, G. P. Jones

Journal:

Year:

2009

Language:

english

File:

PDF, 370 KB

english, 2009

20

Phylogenetic Identification of Symbiotic Dinoflagellates via Length Heteroplasmy in Domain V of Chloroplast Large Subunit (cp23S)—Ribosomal DNA Sequences

ScottR. Santos, Carla Gutierrez-Rodriguez, Mary Alice Coffroth

Journal:

Marine Biotechnology

Year:

2003

Language:

english

File:

PDF, 201 KB

english, 2003

21

Morphological and genetic variation across reef habitats in a broadcast-spawning octocoral

Elizabeth Kim, Howard R. Lasker, Mary Alice Coffroth, Kiho Kim

Journal:

Year:

2004

Language:

english

File:

PDF, 197 KB

english, 2004

22

SYMBIODINIUM (PYRRHOPHYTA) GENOME SIZES (DNA CONTENT) ARE SMALLEST AMONG DINOFLAGELLATES

Todd C. LaJeunesse, Georgina Lambert, Robert A. Andersen, Mary Alice Coffroth, David W. Galbraith

Journal:

Journal of Phycology

Year:

2005

Language:

english

File:

PDF, 157 KB

english, 2005

23

Differential gene expression during thermal stress and bleaching in the Caribbean coral Montastraea faveolata

M. K. DESALVO, C. R. VOOLSTRA, S. SUNAGAWA, J. A. SCHWARZ, J. H. STILLMAN, M. A. COFFROTH, A. M. SZMANT, M. MEDINA

Journal:

Molecular Ecology

Year:

2008

Language:

english

File:

PDF, 392 KB

english, 2008

24

The host transcriptome remains unaltered during the establishment of coral–algal symbioses

CHRISTIAN R. VOOLSTRA, JODI A. SCHWARZ, JULIA SCHNETZER, SHINICHI SUNAGAWA, MICHAEL K. DESALVO, ALINA M. SZMANT, MARY ALICE COFFROTH, MÓNICA MEDINA

Journal:

Molecular Ecology

Year:

2009

Language:

english

File:

PDF, 509 KB

english, 2009

25

Isolation of microsatellite loci from the scleractinian corals, Montastraea cavernosa and Porites astreoides

T. L. SHEARER, M. A. COFFROTH

Journal:

Molecular Ecology Resources

Year:

2004

Language:

english

File:

PDF, 64 KB

english, 2004

26

DNA BARCODING: Barcoding corals: limited by interspecific divergence, not intraspecific variation

T. L. SHEARER, M. A. COFFROTH

Journal:

Molecular Ecology Resources

Year:

2008

Language:

english

File:

PDF, 114 KB

english, 2008

27

Molecular Characterization of Nuclear Small Subunit (ISS)-rDNA Pseudogenes in a Symbiotic Dinoflagellate (Symbiodinium, Dinophyta)

SCOTT R. SANTOS, ROBERT A. KINZIE III, KAZUHIKO SAKAI, MARY ALICE COFFROTH

Journal:

Journal of Eukaryotic Microbiology

Year:

2003

Language:

english

File:

PDF, 870 KB

english, 2003

28

Population-specific DNA fingerprints in a neotropical pseudoscorpion (Cordylochernes scorpioides)

Zeh, David W, Zeh, Jeanne A, Coffroth, Mary Alice, Bermingham, Eldredge

Journal:

Year:

1992

Language:

english

File:

PDF, 363 KB

english, 1992

29

Environmental populations of symbiotic dinoflagellates in the genus Symbiodinium can initiate symbioses with reef cnidarians

Mary Alice Coffroth, Cynthia F. Lewis, Scott R. Santos, Jessica L. Weaver

Journal:

Current Biology

Year:

2006

Language:

english

File:

PDF, 122 KB

english, 2006

30

Genetic Diversity of Symbiotic Dinoflagellates in the Genus Symbiodinium

Mary Alice Coffroth, Scott R. Santos

Journal:

Year:

2005

Language:

english

File:

PDF, 269 KB

english, 2005

31

Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals,Acropora palmataandMontastraea faveolata

Jodi A Schwarz, Peter B Brokstein, Christian Voolstra, Astrid Y Terry, Chitra F Manohar, David J Miller, Alina M Szmant, Alice Mary Coffroth, Mónica Medina

Journal:

Year:

2008

Language:

english

File:

PDF, 135 KB

english, 2008

32

Coral life history and symbiosis: Functional genomic resources for two reef building Caribbean corals,Acropora palmataandMontastraea faveolata

Jodi A Schwarz, Peter B Brokstein, Christian Voolstra, Astrid Y Terry, David J Miller, Alina M Szmant, Alice Mary Coffroth, Mónica Medina

Journal:

Year:

2008

Language:

english

File:

PDF, 502 KB

english, 2008

33

MboI and Macrohaltica— quality of DNA fingerprints is strongly enzyme-dependent in an insect (Coleoptera)

D. W. ZEH, C. A. MAY, M. A. COFFROTH, E. BERMINGHAM

Journal:

Molecular Ecology

Year:

1993

Language:

english

File:

PDF, 257 KB

english, 1993

34

Evolutionary analysis of orthologous cDNA sequences from cultured and symbiotic dinoflagellate symbionts of reef-building corals (Dinophyceae: Symbiodinium)

Christian R. Voolstra, Shinichi Sunagawa, Jodi A. Schwarz, Mary Alice Coffroth, Dave Yellowlees, William Leggat, Mónica Medina

Journal:

Comparative Biochemistry and Physiology Part D: Genomics and Proteomics

Year:

2009

Language:

english

File:

PDF, 731 KB

english, 2009

35

Evolution of length variation and heteroplasmy in the chloroplast rDNA of symbiotic dinoflagellates (Symbiodinium, Dinophyta) and a novel insertion in the universal core region of the large subunit rDNA

Santos, Scott R., Taylor, Derek J., Kinzie III, Robert A., Sakaj, Kazuhiko, Coffroth, Mary Alice

Journal:

Year:

2002

Language:

english

File:

PDF, 319 KB

english, 2002

36

Isolation and characterization of microsatellite loci in Symbiodinium B1/B184, the dinoflagellate symbiont of the Caribbean sea fan coral, Gorgonia ventalina

JASON P. ANDRAS, NATHAN L. KIRK, MARY ALICE COFFROTH, C. DREW HARVELL

Journal:

Molecular Ecology Resources

Year:

2009

Language:

english

File:

PDF, 82 KB

english, 2009

37

Effects of predator exclusion on recruit survivorship in an octocoral (Briareum asbestinum) and a scleractinian coral (Porites astreoides)

Evans, M. J., Coffroth, M. A., Lasker, H. R.

Journal:

Year:

2013

Language:

english

File:

PDF, 246 KB

english, 2013

38

Cryptic diversity hides host and habitat specialization in a gorgonian-algal symbiosis

Prada, Carlos, McIlroy, Shelby E., Beltrán, Diana M., Valint, Daniel J., Ford, Scott A., Hellberg, Michael E., Coffroth, Mary Alice

Journal:

Molecular Ecology

Year:

2014

Language:

english

File:

PDF, 421 KB

english, 2014

39

Variation in symbiont uptake in the early ontogeny of the upside-down jellyfish, Cassiopea spp.

Mellas, Rachel E., McIlroy, Shelby E., Fitt, William K., Coffroth, Mary Alice

Journal:

Journal of Experimental Marine Biology and Ecology

Year:

2014

Language:

english

File:

PDF, 2.15 MB

english, 2014

40

The Adaptive Bleaching Hypothesis: Experimental Tests of Critical Assumptions

Robert A. Kinzie, III, Michelle Takayama, Scott R. Santos and Mary Alice Coffroth

Journal:

Biological Bulletin

Year:

2001

Language:

english

File:

PDF, 300 KB

english, 2001

41

Identification of Marine Invertebrate Larvae by Means of PCR-RAPD Species-Specific Markers

Mary Alice Coffroth and John M. Mulawka III

Journal:

Limnology and Oceanography

Year:

1995

Language:

english

File:

PDF, 2.27 MB

english, 1995

42

Population Structure of a Clonal Gorgonian Coral: The Interplay Between Clonal Reproduction and Disturbance

Mary Alice Coffroth and Howard R. Lasker

Journal:

Year:

1998

Language:

english

File:

PDF, 2.71 MB

english, 1998

43

Foraging Patterns of Cyphoma gibbosum on Octocorals: The Roles of Host Choice and Feeding Preference

H. R. Lasker, M. A. Coffroth and L. M. Fitzgerald

Journal:

Biological Bulletin

Year:

1988

Language:

english

File:

PDF, 568 KB

english, 1988

44

In situ Rates of Fertilization among Broadcast Spawning Gorgonian Corals

Howard R. Lasker, Daniel A. Brazeau, Julio Calderon, Mary Alice Coffroth, Rafel Coma and Kiho Kim

Journal:

Biological Bulletin

Year:

1996

Language:

english

File:

PDF, 439 KB

english, 1996

45

Stable Symbiodinium Composition in the Sea Fan Gorgonia ventalina during Temperature and Disease Stress

Nathan L. Kirk, Jessica R. Ward and Mary Alice Coffroth

Journal:

Biological Bulletin

Year:

2005

Language:

english

File:

PDF, 411 KB

english, 2005

46

Responses of Clonal Reef Taxa to Environmental Change

LASKER, HOWARD R., COFFROTH, MARY ALICE

Journal:

Integrative and Comparative Biology

Year:

1999

Language:

english

File:

PDF, 976 KB

english, 1999

47

Development of Microsatellite Markers as a Molecular Tool for Conservation Studies of the Mediterranean Reef Builder Coral Cladocora caespitosa (Anthozoa, Scleractinia)

Casado-Amezua, P., Garcia-Jimenez, R., Kersting, D. K., Templado, J., Coffroth, M. A., Merino, P., Acevedo, I., Machordom, A.

Journal:

Journal of Heredity

Year:

2011

Language:

english

File:

PDF, 110 KB

english, 2011

48

Population structure of the coralsOrbicella faveolataandAcropora palmatain the Mesoamerican Barrier Reef System with comparisons over Caribbean basin-wide spatial scale

Porto-Hannes, I., Zubillaga, A. L., Shearer, T. L., Bastidas, C., Salazar, C., Coffroth, M. A., Szmant, A. M.

Journal:

Year:

2015

Language:

english

File:

PDF, 750 KB

english, 2015

49

[Elsevier Oceanography Series] Global Ecological Consequences of the 1982–83 El Nino—SouthernOscillation Volume 52 || Coral Mortality Outside of the Eastern Pacific During 1982-1983: Relationship to El Niño

Year:

1990

Language:

english

File:

PDF, 1.99 MB

english, 1990

50

Molecular Genetic Evidence That Dinoflagellates Belonging to the Genus Symbiodinium Freudenthal Are Haploid

Scott R. Santos and Mary Alice Coffroth

Journal:

Biological Bulletin

Year:

2003

Language:

english

File:

PDF, 589 KB

english, 2003